Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58

 Score =  566 bits (1458), Expect = e-166
 Identities = 289/522 (55%), Positives = 377/522 (72%), Gaps = 1/522 (0%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L + +LSV F   G      + VS  +  GE +ALVGESGSGKSVTAN+IL+LLP  +A
Sbjct: 9   LLSVRDLSVAFHQGGATSVAVDHVSFDLMPGEVVALVGESGSGKSVTANSILKLLPYPAA 68

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
            + SG I F   D L   ERALR +RG  I MIFQEPM SLNPLH I +Q+ E L +H+ 
Sbjct: 69  SHPSGKILFDGKDMLTLPERALRAVRGNDITMIFQEPMTSLNPLHTIERQIGEILELHQA 128

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           +    A Q+ +E L +VGIR PE ++ AYPHELSGG+RQRVMIAMAL N P+LLIADEPT
Sbjct: 129 ITGAEARQRTLELLLQVGIREPEKRLKAYPHELSGGQRQRVMIAMALANRPKLLIADEPT 188

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV+VQAQIL+LL  L+ + GM+MLFITHDL IVR+ ADRV VM  G++VET     +
Sbjct: 189 TALDVTVQAQILELLGDLKTQHGMSMLFITHDLGIVRKFADRVCVMTKGKIVETGTVEQV 248

Query: 245 FAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTD 304
           F  P H YT+ L+ A+P+G P  +    P ++Q + ++VWFPIK G  RR   ++KAV  
Sbjct: 249 FTDPQHAYTRHLLAAEPKGEPPHSDASKPVVMQGDDIKVWFPIKAGLMRRVIDHVKAVDG 308

Query: 305 MSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKM 364
           +  TL  GQ++G+VGESGSGK+T G+A+ +L+AS+G I F GQ + +     M P R+++
Sbjct: 309 IDITLRAGQTVGVVGESGSGKTTLGLALSRLIASKGRISFIGQSIDSYSYEMMKPLRNRL 368

Query: 365 QVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGLDVDTRHRYPN 423
           QVVFQDPY +L+PRMSV ++I EGL+VH + L+ DE D  +   ++EVGLD  TR RYP+
Sbjct: 369 QVVFQDPYGSLSPRMSVGEIIAEGLKVHERSLSADERDTRVATALEEVGLDPATRWRYPH 428

Query: 424 EFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISH 483
           EFSGGQRQRIAIARA+VLKP F++LDEPTS+LD +VQAQV+DLL+DLQ K++L YLFISH
Sbjct: 429 EFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQAKHELAYLFISH 488

Query: 484 DLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
           DL V++AL +  IVM+ G++VE G    +F NP   YT+ L+
Sbjct: 489 DLRVVKALANDLIVMRHGKVVESGPAAEIFANPQQDYTKALL 530



 Score =  159 bits (403), Expect = 2e-43
 Identities = 100/264 (37%), Positives = 160/264 (60%), Gaps = 19/264 (7%)

Query: 5   VLKIDNLSVGFGI-AGQARPV------TEGVSLTIARGETLALVGESGSGKSVTANAILR 57
           V++ D++ V F I AG  R V       +G+ +T+  G+T+ +VGESGSGK+    A+ R
Sbjct: 279 VMQGDDIKVWFPIKAGLMRRVIDHVKAVDGIDITLRAGQTVGVVGESGSGKTTLGLALSR 338

Query: 58  LLP-KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLV 116
           L+  KG   ++  SI     + ++     LR     R+ ++FQ+P  SL+P   +G+ + 
Sbjct: 339 LIASKGRISFIGQSIDSYSYEMMK----PLRN----RLQVVFQDPYGSLSPRMSVGEIIA 390

Query: 117 ETLAIH-RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEP 175
           E L +H R L A   + +    L +VG+  P  +   YPHE SGG+RQR+ IA A++ +P
Sbjct: 391 EGLKVHERSLSADERDTRVATALEEVGL-DPATRWR-YPHEFSGGQRQRIAIARAMVLKP 448

Query: 176 ELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQL 235
             ++ DEPT+ALD+SVQAQ++DLL+ LQ +  +A LFI+HDL +V+ +A+ + VM+ G++
Sbjct: 449 RFVMLDEPTSALDMSVQAQVVDLLRDLQAKHELAYLFISHDLRVVKALANDLIVMRHGKV 508

Query: 236 VETNACHTLFAAPAHPYTQQLINA 259
           VE+     +FA P   YT+ L+ A
Sbjct: 509 VESGPAAEIFANPQQDYTKALLAA 532