Pairwise Alignments

Query, 198 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 234 a.a., TetR family transcriptional regulator from Pseudomonas simiae WCS417

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 52/201 (25%), Positives = 90/201 (44%), Gaps = 24/201 (11%)

Query: 1   MARKCNFDREEKLHQAMTLFWQKGYANTAISDLVDHL--QINRFSLYNAFGDKQKLYYEA 58
           M R   FDRE  + QA+ LFWQ GY  T+++ L   L   I+  S Y AFG K+ L+ E 
Sbjct: 4   MGRPRTFDRERAVDQALHLFWQHGYDATSLAQLKAGLGGGISAPSFYAAFGSKEALFDEC 63

Query: 59  LDRYLNLVSSPALKDLELESAAWPE-------LKAFLQHFAALQREGN--RGCFMQNALV 109
           + RYL   +       ++    W E       ++  L+  A +Q E    +GC +   ++
Sbjct: 64  VQRYLATYA-------KVTKCLWDESLPPRQAVETALRQSARMQCEDGHPKGCMVALGVM 116

Query: 110 EHADTDDEVLNKGHALFDHLLHL---IARALNNAIQQGQIAAHLCADSLAPLVLTQMQGM 166
                D+  +  G  L    L     I   +  A++ GQ+   +    +A +  + +QG+
Sbjct: 117 SAPSPDNARVADG--LTQSRLRTRAGIVACVERAMRLGQLPQTVNPAVMATVFDSFLQGI 174

Query: 167 RVLGK-AQRHANLEQGLEALI 186
            +L +    HA ++  +  L+
Sbjct: 175 SILARDTVPHATIDAAISQLL 195