Pairwise Alignments

Query, 198 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 216 a.a., Probable transcription regulator protein of MDR efflux pump cluster from Sphingobium sp. HT1-2

 Score = 56.2 bits (134), Expect = 4e-13
 Identities = 54/193 (27%), Positives = 88/193 (45%), Gaps = 12/193 (6%)

Query: 3   RKCNFDREEKLHQAMTLFWQKGYANTAISDLVDHLQINRFSLYNAFGDKQKLYYEALDRY 62
           R   FD EE L  A+ +FW++GY   ++++L + + I + SLY  FG+K+ L+ +ALD Y
Sbjct: 25  RPREFDPEEALAAALQVFWRRGYEGASLAELTEAMGITKPSLYACFGNKEALFRKALDLY 84

Query: 63  LNLVSSPALKDLELESAAWPELKAFLQHFAALQR-----EGNRGCFMQNALVEHAD-TDD 116
                      LE  +A     +  L+   A+Q      +G  G         H++   D
Sbjct: 85  ERDKLCYVKSSLEAPTAK-AVAERMLRGSLAIQTGNKDPQGCMGVISSVGGTAHSECIRD 143

Query: 117 EVLNKGHALFDHLLHLIARALNNAIQQGQIAAHLCADSLAPLVLTQMQGMRV-LGKAQRH 175
           EVL +  +    LL    RA      +G + A +   +LA  + T +QGM V  G     
Sbjct: 144 EVLARRASSDRALLDRFERAQ----AEGDLPAGVEPQALACYLSTVIQGMAVQAGAGVPR 199

Query: 176 ANLEQGLEALIRL 188
             LEQ ++  + +
Sbjct: 200 DRLEQLIDTTLTM 212