Pairwise Alignments

Query, 198 a.a., TetR/AcrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., orf, hypothetical protein (VIMSS) from Escherichia coli BW25113

 Score = 66.2 bits (160), Expect = 4e-16
 Identities = 55/182 (30%), Positives = 86/182 (47%), Gaps = 15/182 (8%)

Query: 7   FDREEKLHQAMTLFWQKGYANTAISDLVDHLQINRFSLYNAFGDKQKLYYEALDRYLNLV 66
           FDR+  L +AM LFWQ GY  T+++DLV+       +LY  F +K+ L+   LDRY++  
Sbjct: 19  FDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRF 78

Query: 67  SSPALKDLELESAAWPELKAFLQHFAAL-----QREGNRGCFM-QNALVEHADTDD--EV 118
           ++     L  E  +     A   +FAA+      ++   GCFM  N      D+ D    
Sbjct: 79  AAKHEAQLFCEEKSVE--SALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANT 136

Query: 119 LNKGHALFDHLLHLIARALNNAIQQGQIAAHLCADSLAPLVLTQMQGMRVLGKAQRHANL 178
           L   HA+ +  L    + L     +G+I  H     LA  +   +QGM +   A+  A+L
Sbjct: 137 LKSRHAMQERTLQ---QFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSI--SAREGASL 191

Query: 179 EQ 180
           E+
Sbjct: 192 EK 193