Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 263 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 52.4 bits (124), Expect = 1e-11
 Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 14/183 (7%)

Query: 5   LLFASL--CLMSTCLHAKPQRVTIFADDAYPPYSYAENGRAVGIYPEILRAADVLMTEFE 62
           LL A+L  CL       K + VT    + + PY Y +NG   G+  E   A        E
Sbjct: 7   LLTATLFTCLSLAAYGEKLRIVT----EPWAPYVYDDNGTMRGLDYETT-AIVFQRLGVE 61

Query: 63  IELQPIPWRRGLKLLEAGRIFALLPPYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKR 122
           ++ Q +PW+R L +L+ G+    L  ++  +R   +   S+P+ D E V+F  N    + 
Sbjct: 62  VQWQFLPWKRCLAMLDQGQADGALDIFHSHERDALLLYPSEPLSDVEFVLFYAN---ERP 118

Query: 123 KSTEWPRDFYGLTIGMNDGFSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRIDCYV 182
              +   D  GLT+G + G+  G      A+       + A  +  N  KL   RID  +
Sbjct: 119 HPVQGLEDLRGLTVGTSPGYLYGADFSDSAL----FNHEPAPSHEANFGKLMLGRIDLVI 174

Query: 183 NDR 185
            DR
Sbjct: 175 TDR 177