Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., cystine transporter subunit from Pseudomonas simiae WCS417

 Score = 53.1 bits (126), Expect = 6e-12
 Identities = 57/245 (23%), Positives = 101/245 (41%), Gaps = 30/245 (12%)

Query: 20  KPQRVTIFADDAYPPYSYA-ENGRAVGIYPEILRAADVLMTEF--EIELQPIPWRRGLKL 76
           K   + I  +  YPP+S+  E+G+  G   E+   ++ L  E   +++LQ  PW   L  
Sbjct: 38  KAGEIKIGLEGTYPPFSFVDESGKLSGFEVEL---SEALAKELGVKVKLQATPWDGILAA 94

Query: 77  LEAGRIFALLPPYYYPQRRPYIHPYSDP--ILDEEVVVFCQNAWLSKRKSTEWPRDFYGL 134
           LE+ R+ A++      + R   + +S P  +   + +V  +N    K        D  G 
Sbjct: 95  LESKRLDAVVNQVTISEERKKKYDFSKPYTVSGIQALVLTKNVGTIKTAD-----DLAGK 149

Query: 135 TIGMNDGFSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRIDCYVNDRISILWELTR 194
            +G+  G +      W    + K  +K  N +      LR  RID  + DR++ L    +
Sbjct: 150 KVGVGLGTN---YEQWLKDNQPKAIIKTYNDDPTKFQDLRIGRIDTILIDRLAALEYAKK 206

Query: 195 LKREGIVDTVNFSMAAKISLEQGYIGFTNRNLEQYPYQSQFVAAFNSALAELKSSGQLDK 254
            K   +         A I+L +G              + + + A N AL +L++ G L K
Sbjct: 207 AKDTSVTGDAFSRQEAGIALRKG--------------EPELLDAVNKALDKLRADGTLKK 252

Query: 255 IVGRY 259
           +  +Y
Sbjct: 253 LSEKY 257