Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., putative Periplasmic binding protein from Pseudomonas putida KT2440

 Score = 66.6 bits (161), Expect = 5e-16
 Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 18/257 (7%)

Query: 3   IGLLFASLCLMSTCLHAKPQRVTIFADDAYPPYSYAENGRAVGIYPEILRAADVLMTEFE 62
           I  LF  L L+     A  +R+ +  DD + PY +  NG+  GI  E+       +   E
Sbjct: 4   IARLFWILLLVCLSPLALGERLRLVTDD-WAPYVFQHNGQPRGIDYEVASQVFARLG-VE 61

Query: 63  IELQPIPWRRGLKLLEAGRIFALLPPYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKR 122
           +E Q +PW+R L + E G    +L  +    R+PY+   ++P+ + E V+F      S+R
Sbjct: 62  VEWQFLPWKRCLAMAEQGLADGILDIFQTDARQPYMVYGAEPMSEVEFVLFQSR---SRR 118

Query: 123 KSTEWPRDFYGLTIGMNDGFSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRIDCYV 182
            +     D  GLT+G + G++  G+ F +A   K+   + A     N  KL   RID  +
Sbjct: 119 HAVTHLDDLAGLTVGTSPGYAY-GKGFTEAPHFKR---EAAPTQEANFGKLILGRIDLVI 174

Query: 183 NDRISILWELTRLKREGIVDTVNFSMAAKISLEQGYIGFTNRNLEQYPYQSQFVAAFNSA 242
            DR    + L +L  +  V+     +   IS +  Y+G   +     P +     AF   
Sbjct: 175 TDRRVGHYLLRQLGLQQQVE----ELPLVISRQAQYLGLVRK-----PGREALAVAFAEE 225

Query: 243 LAELKSSGQLDKIVGRY 259
           L   K       I  RY
Sbjct: 226 LQRFKQEPAYAAISNRY 242