Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., periplasmic cystine-binding protein from Pseudomonas putida KT2440

 Score = 52.0 bits (123), Expect = 1e-11
 Identities = 51/243 (20%), Positives = 104/243 (42%), Gaps = 32/243 (13%)

Query: 24  VTIFADDAYPPYSYA-ENGRAVGIYPEILRAADVLMTEFEIE--LQPIPWRRGLKLLEAG 80
           + +  +  YPP+S+  ENG+  G   E+   +++L  E  ++  +QP  W   L  LE+ 
Sbjct: 40  INVGLEGTYPPFSFQDENGKLTGFEVEL---SELLAKELGVKAKIQPTKWDGILAALESK 96

Query: 81  RIFALLPPYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKRKSTEW----PRDFYGLTI 136
           R+  ++      + R   + +S+P     +      A + K+K+ +      +D  G  +
Sbjct: 97  RLDVVVNQVTISEERKKKYDFSEPYTVSGI-----QALILKKKAEQLNIKGAQDLAGKKV 151

Query: 137 GMNDGFSLGGQAFWKAVEEKKIEVKYANGNRVNLLKLRGDRIDCYVNDRISILWELTRLK 196
           G+  G +      W   +  + +V+    +      LR  RID  + DR++ L    + K
Sbjct: 152 GVGLGTNYEQ---WVKKDVPQADVRTYEDDPSKFADLRNGRIDAILIDRLAALEYAQKAK 208

Query: 197 REGIVDTVNFSMAAKISLEQGYIGFTNRNLEQYPYQSQFVAAFNSALAELKSSGQLDKIV 256
              +       + + ++L +G              + + +AA N A+ +LK+ G L K+ 
Sbjct: 209 DTELAGDAFSRLESGVALRKG--------------EPELLAAINKAIDKLKADGTLAKLS 254

Query: 257 GRY 259
            +Y
Sbjct: 255 EKY 257