Pairwise Alignments

Query, 261 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., hypothetical protein from Pseudomonas sp. DMC3

 Score = 50.4 bits (119), Expect = 4e-11
 Identities = 48/177 (27%), Positives = 81/177 (45%), Gaps = 13/177 (7%)

Query: 12  LMSTCLH--AKPQRVTIFADDAYPPYSYAENGRAVGIYPEILRAADVLMTEFEIELQPIP 69
           ++ TCL   A+ +++ I  +  + PY Y + G+ +G+  E   A        E+E Q +P
Sbjct: 11  ILLTCLSVAARGEKLRIVTEP-WAPYVYEQGGKNLGLDYETT-AIVFQRLGIEVEWQFLP 68

Query: 70  WRRGLKLLEAGRIFALLPPYYYPQRRPYIHPYSDPILDEEVVVFCQNAWLSKRKSTEWPR 129
           W+R L +LE G+    L  ++  +R   +   S+P+ D E V+F  N       + E   
Sbjct: 69  WKRCLSMLETGQADGALDIFHSAERDATLLYPSEPLSDVEFVMFYANERPHPFNTLE--- 125

Query: 130 DFYGLTIGMNDGFSLGGQAFWKAVEEKKIEVKY-ANGNRVNLLKLRGDRIDCYVNDR 185
              GLTIG + G+      +     +  + V+  A  +  N  KL   RID  + DR
Sbjct: 126 QLKGLTIGTSPGY-----LYSPDFSQSDLFVREPAPTHEANFGKLVRGRIDLLITDR 177