Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 18/175 (10%)

Query: 147 IARQVFSGLTRLDEEEQLQPDLAHAWQALSD-THWRFYLRPGVRFHNGNLLTTELIVQNL 205
           I  ++  GL   D + + +P LA AW    D   + F LR GV++H+G   T+  +  ++
Sbjct: 61  IGPKIVEGLLTYDYDLKPKPLLATAWSQSKDGLQYTFELRKGVKWHDGKDFTSADVAFSI 120

Query: 206 WQLRLLN-----LFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILPAESDRNPD 260
             L+ ++      FA++  V +P      + L KP   L   LA   + I+P       D
Sbjct: 121 LTLKQVHPRGRGTFANVVDVKTPDANTAVIVLSKPSPFLLTALASTESPIVPKHLYEGTD 180

Query: 261 -----FDLMPVGTGPYKVVLND---EKRLVLQAFDGYFGF-RPLLDRVEV-WVID 305
                ++  PVGTGP+  V  +      ++L+    Y+   +P LDRV V +V+D
Sbjct: 181 IASNKYNSAPVGTGPF--VFKEWVQGSHIILERNPNYWDKPKPYLDRVVVRFVLD 233