Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 65.5 bits (158), Expect = 5e-15
 Identities = 62/178 (34%), Positives = 88/178 (49%), Gaps = 21/178 (11%)

Query: 141 RRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSD-THWRFYLRPGVRFHNGNLLTTE 199
           +   ++++ +V  GL R D +   QP LA AWQ   D   + F LRPGV+FH+G+  T E
Sbjct: 79  KTDNRNVSAKVTEGLLRYDAKFTPQPLLATAWQVSPDGLKYSFKLRPGVKFHDGHDFTAE 138

Query: 200 -----LIVQNLWQLRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILPA- 253
                ++ Q     R     A+++RVD+P P    + L +P   L   L+ A   I+PA 
Sbjct: 139 DVRYSVLTQKKQGPRGRITLANVERVDTPDPLTAVIVLSRPAPFLLKSLSSAELPIVPAH 198

Query: 254 -----ESDRNPDFDLMPVGTGPYKVVLNDEKR---LVLQAFDGYF--GFRPLLDRVEV 301
                E   NP+    PVGTGP+  V     R   LVL+    Y+  G+ P LDRV V
Sbjct: 199 RYSDGEPLGNPNI-TAPVGTGPF--VFEQWVRGSHLVLRKNPNYWRKGY-PHLDRVIV 252