Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 51.2 bits (121), Expect = 1e-10
 Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 20/158 (12%)

Query: 133 MLNPQKPMRRSEQH-------IARQVFSGLTRLDEEEQLQPDLAHAWQALSD-THWRFYL 184
           +++P+ P   +  H       I+ +   GL   D +   QP LA AW   +D   + F L
Sbjct: 50  LIDPEPPTLTTIAHSAGSSVLISAKTTEGLLTYDFDLSPQPQLATAWTVSADGLQYTFTL 109

Query: 185 RPGVRFHNGNLLTTELIVQNLWQLRLLN-----LFAHIDRVDSPYPWAVDVHLQKPDTRL 239
           R GVR+H+G   T+  +  ++  L+  +      F+ +  V +P  +   + L KP   L
Sbjct: 110 RRGVRWHDGKPFTSADVAHSIGLLKQYHPRGRATFSSVAEVRTPDAYTAVLVLSKPVPYL 169

Query: 240 PLLLAEACAKILP------AESDRNPDFDLMPVGTGPY 271
              L+ + + I+P       ++D NP  +  P+GTGP+
Sbjct: 170 LTALSASESPIVPRHLYESGKADANP-ANNAPIGTGPF 206