Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., putative Opine ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 49/196 (25%), Positives = 86/196 (43%), Gaps = 28/196 (14%)

Query: 126 PYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRL----DEEEQLQPDLAHAWQALSDTH-W 180
           P    ++ L+P +     ++ I  ++F+ L R      +   L+ DLA  W++  D   W
Sbjct: 40  PGIADITSLDPHRASLVGDKGIVAEMFNALVRFPPGSSDPAALEADLAERWESSDDKKVW 99

Query: 181 RFYLRPGVRFHNG-NLLTTELIVQNLWQL------RLLNLFAHIDRVDSPYPWAVDVHLQ 233
            F+LR GV FH G   L    +V +L +            F  +++V++   + V V L+
Sbjct: 100 TFFLRKGVMFHGGYGELKAADVVYSLQRAADPKRSSFSANFTALEKVEALDDYTVKVTLK 159

Query: 234 KPDTRL---------PLLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLV-L 283
            PDT             ++++A A+ L         +   P+GTGP+    +  ++ V L
Sbjct: 160 YPDTAFLGRVSNYHGGQIVSKAAAEKL------GERYGQAPIGTGPFAFSEHITQQYVKL 213

Query: 284 QAFDGYFGFRPLLDRV 299
            A D YF  +P L  +
Sbjct: 214 VANDQYFRGKPKLGAI 229