Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., putative dipeptide/oligopeptide/nickel ABC-type transport system periplasmic component from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  183 bits (464), Expect = 2e-50
 Identities = 149/554 (26%), Positives = 240/554 (43%), Gaps = 25/554 (4%)

Query: 19  GQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAGRGKLSQLIFKRSRADVSE 78
           GQ  E Q++++  I  C+ RN RI L KM +E W++W P  GRGK S+L    S   +  
Sbjct: 18  GQTHELQMQEIAAIFGCSVRNCRIALKKMHQEKWLDWQPQRGRGKRSRLHLLTSPEKLFS 77

Query: 79  NLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGLQVVRLPYYRQLSMLNPQK 138
               + L +   G     +  D   L ++     GVQ +     VR+PYYR L  LNP  
Sbjct: 78  QNVNKLLEKQDYGNVLRFIGNDKYLLDRLSLWRFGVQDKSSETRVRIPYYRNLDPLNPLV 137

Query: 139 PMRRSEQHIARQVFSGLTRLDE-EEQLQPDLAHAWQALSD-THWRFYLRPGVRFHNGNLL 196
           P+RR+E+H+ RQ  SGLTR D  + ++ PD+AH W    D T W F+L+   RF +G  L
Sbjct: 138 PLRRTERHLLRQCLSGLTRYDAVQGRIVPDIAHYWTHNEDFTRWEFWLKSTARFADGCEL 197

Query: 197 TTELIVQNLWQL----RLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILP 252
               + + L       +   +F+ I  + +  PW + +    P  RL  LLA     +  
Sbjct: 198 DASAVQRCLLAASQSPQFAPIFSPIKTITADAPWHLVIETHHPVRRLDCLLATQPTMLFD 257

Query: 253 AESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRVEVWVIDEVHSSMV 312
            +             TG + +  + +  +VL+    +   RP LD + ++     H SM 
Sbjct: 258 YQHGHIR-------CTGAFHLQEHSDNFMVLRRNQHWHQARPGLDEITIFTWAPEHISMS 310

Query: 313 FPSLSNPMKTARGSSTEEVELDPGCTYLLLNRRNGVAKDEHWARYLTDKLNALNLF--RL 370
           F  L    +        E  L+  C ++LL+  +G   DE   R++   L  + L     
Sbjct: 311 FIPLLRGEEVQDDRPLNERSLEQSCCFVLLD-GDGAFADEAGRRFINYLLQPVELLSQTQ 369

Query: 371 LPEEKIIELGVLPAYGLKPGWYHHSA-AAQRTLPPESKELTIAYHAQHPMFPTVANAIKQ 429
           LP+E    L V  A G+ P W H        T P   ++  I    Q P    +A AI++
Sbjct: 370 LPDEYARILSV--AQGMLPQWNHRPVDFGGITAPFNLRQPVIISTFQQPELVELAGAIRR 427

Query: 430 LLSQDGI--TVNVIKYEHTVVETE-NVDIWIKPMGIANHRDDALAGWLLNYSDIEFLSKG 486
           LL +  I   + +  ++H   +     DIW+    +      A   WL + +    L + 
Sbjct: 428 LLERWHIRAEIRIDAFDHFNNQLRPPADIWLSNFMLDTLSVPAFLEWLASTALFTRLPES 487

Query: 487 EDFNQWVSLIDAWRADSSALFPA-KELGKSLVEKHQLIPMFHCWLGISKDQCGALQNAKC 545
           +  N    L     +D    F         +  +  +IP+ H W+  + ++    ++   
Sbjct: 488 QRQNLNALLPTILNSDDEQAFATIAAFFHEMTHQRYVIPLLHHWMEFATEKSFTWRD--L 545

Query: 546 NALGWFDFSQVWVK 559
           N LGW DFSQ+W++
Sbjct: 546 NTLGWPDFSQLWLE 559