Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., predicted peptide transporter subunit: periplasmic-binding component of ABC superfamily (NCBI) from Escherichia coli BW25113

 Score = 55.8 bits (133), Expect = 4e-12
 Identities = 46/168 (27%), Positives = 81/168 (48%), Gaps = 11/168 (6%)

Query: 134 LNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSD-THWRFYLRPGVRFHN 192
           L+P        Q +A+  + GL  LD+E +L+  LA ++    D   +   LR G++F +
Sbjct: 41  LDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTVKLREGIKFQD 100

Query: 193 GNLLTTELIVQNLWQ-------LRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAE 245
           G       +  NL +       L+  NL+ +I + ++  P  V + L++P +    +LA 
Sbjct: 101 GTDFNAAAVKANLDRASDPANHLKRYNLYKNIAKTEAIDPTTVKITLKQPFSAFINILAH 160

Query: 246 -ACAKILPAESDR-NPDFDLMPVGTGPYKV-VLNDEKRLVLQAFDGYF 290
            A A I PA  ++   +    PVGTGPY++   N    + ++ F GY+
Sbjct: 161 PATAMISPAALEKYGKEIGFYPVGTGPYELDTWNQTDFVKVKKFAGYW 208