Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 551 a.a., ABC-type uncharacterized transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  332 bits (852), Expect = 2e-95
 Identities = 193/564 (34%), Positives = 307/564 (54%), Gaps = 20/564 (3%)

Query: 1   MSSPRLRVQFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAG 60
           M S RL+ QF  L++  +GQ  ET L ++ D+L C+RR+ R +LN M+++GW+ W   AG
Sbjct: 1   MPSGRLQQQFIRLWQCCEGQSQETTLNELADLLSCSRRHMRTLLNTMQQQGWLSWEAEAG 60

Query: 61  RGKLSQLIFKRSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGL 120
           RGK S+L F  +   + +  A   L + +I Q   ++  D A + Q++ S+LG   ++G 
Sbjct: 61  RGKRSRLTFLYTGLALQQQRAEDLLEQDRIDQLVQLVG-DKAAVRQMLVSHLGRSFRQGR 119

Query: 121 QVVRLPYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEE-QLQPDLAHAWQALSDTH 179
            ++R+ YYR +  L P   +RRSE H+ARQ+FSGLTR++EE  +L+ D+AH WQ LS  H
Sbjct: 120 HILRVLYYRPMKNLLPGTALRRSETHMARQIFSGLTRINEENGELEADIAHHWQQLSPRH 179

Query: 180 WRFYLRPGVRFHNGNLLTTELIVQNLWQLRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRL 239
           WRF+LRPG+ FH+G  L    ++ +L + R L L++HI RV SP  W +D+ L + D  L
Sbjct: 180 WRFFLRPGIHFHHGRELEMHDVIASLERARKLPLYSHISRVHSPTAWTLDIELSQQDKWL 239

Query: 240 PLLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRV 299
           P LL    + ILP E +   +F  +P+GTGPY V  N+  +L ++AFD YFG+R L+D V
Sbjct: 240 PWLLGYVPSMILPGEWESMNNFASLPIGTGPYSVSRNNSNQLKIRAFDDYFGYRALIDEV 299

Query: 300 EVWVIDEVHSSMVFP-SLSNPMKTARGSSTEEVELDPGCTYLLLNRRNGVAKDEHWARYL 358
            VWV+ +++  +    +L  P     G    E  L+ GC YLL +RR     ++   +++
Sbjct: 300 NVWVLPDLNEDLSCGLTLEGP---TTGEKAVESRLEEGCYYLLFDRRTHRGANQAVRKWI 356

Query: 359 TDKLNALNLFRLLPEEKIIELGVLPAYGLKPGWYHHSAAAQRTLPPESKELTIAYHAQHP 418
           +  L+  NL  +   E+  +    PAYGL P W HH+       P   + +T+ Y+ +H 
Sbjct: 357 SHVLSPSNL--IYHAEEQYQTYWFPAYGLLPRW-HHARPVHCDKPAGLESITLTYYREHV 413

Query: 419 MFPTVANAIKQLLSQDGITVNVIKYEHTVVETENV--DIWIKPMGIANHRDDALAGWLLN 476
               +A  + +LL+ +G+ + V + ++       +  DIW+         D +L   L  
Sbjct: 414 EHRFIARIMTRLLAAEGVRLEVREVDYDEWHQGEIASDIWLNSANFTLPLDFSLFSHLYE 473

Query: 477 YSDIEFLSKGEDFNQWVSLIDAWRADSSALFPAKELGKSLVEKHQLIPMFHCWLGISKDQ 536
              I+      D+ Q  +L   WRA    L       + L+ +  ++P+ H WL I   +
Sbjct: 474 VPLIQHCI-DRDWQQDAAL---WRAGEMNL---AAWCQQLLAEQAIVPLIHHWLMIQGQR 526

Query: 537 CGALQNAKCNALGWFDFSQVWVKP 560
             +++  + N LGWFDF   W  P
Sbjct: 527 --SMRGLRMNTLGWFDFKSAWFAP 548