Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., ABC-type uncharacterized transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  179 bits (454), Expect = 3e-49
 Identities = 146/570 (25%), Positives = 252/570 (44%), Gaps = 37/570 (6%)

Query: 9   QFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAGRGKLSQLI 68
           Q+  L++   G   +  + ++    FC+ R+ R +L + +E GW+ W   +GRGK  +L 
Sbjct: 9   QYHRLWQPSLGATQQVTIGELAARCFCSERHVRTLLRQAQEAGWLSWRAQSGRGKRGELT 68

Query: 69  FKRSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGLQVVRLPYY 128
           F  +   +   +    L  G+   A  +       L  ++  +LG Q Q     +R+PYY
Sbjct: 69  FHVAPESLRNAMMEEALKSGQQHNALELAQLAPEALRSLLHPFLGGQWQNDTPTLRIPYY 128

Query: 129 RQLSMLNPQKPMRRSEQHIARQVFSGLTRLD-EEEQLQPDLAHAWQAL-SDTHWRFYLRP 186
           R L  L P     R+EQH+A QVFSGLTR +    +   DLAH W     D  W FY+R 
Sbjct: 129 RSLEPLQPGFLPGRAEQHLAGQVFSGLTRFNGNSSEPAGDLAHHWDVSDDDLRWHFYIRS 188

Query: 187 GVRFHNGNLLTTELIVQNLWQL----RLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLL 242
            + +HNG+ + T  + ++L  L     L  LF  +  +++ +P  +   L +PD  LP  
Sbjct: 189 TLHWHNGDKIETAQLQRSLTALLTLPALRTLFQSVLWIETTHPQCLTFALHQPDYWLPHR 248

Query: 243 LAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRVEVW 302
           LA  C+++       +PD     VG+GP+++   +   + L++ + Y    PLL  +E W
Sbjct: 249 LATYCSRL------AHPDHP--AVGSGPFRLAAFEPDLVRLESHEQYHLSHPLLKAIEYW 300

Query: 303 VIDEVHSSMVFPSLSNPMKTARGSSTE-----EVELDPGCTYLLLNRRNGVAKDEHWARY 357
           +  ++    +  S  +P++ A G + E      V       +  L  +      E  A+ 
Sbjct: 301 ITPQLFDYSLGTSCRHPVQIAIGEADELESLRLVSSSTSLGFCYLTLKQSARLSEIQAKR 360

Query: 358 LTDKLNALNLFRLLPEEKIIELGVLPAYGLKPGWY--HHSAAAQRTLPPESKELTIAYHA 415
           L   +N ++L RLL    + E  + P   L P W        +  TLP   + LT+ YH 
Sbjct: 361 L---INIIHLSRLLHTLPLNEGLITPTQELLPDWTIPEWPDLSDVTLP---EALTLVYHL 414

Query: 416 QHPMFPTVANAIKQLLSQDGITVNVIKYEHTV----VETENVDIWIKPMGIANHRDDALA 471
              +  T+A+ +K  L+  G  + VI ++       +E  + DI +    I    +  L 
Sbjct: 415 PVELH-TMASQLKAYLALQGCELTVIFHDAKTWDGCLELADADIMMGDRLIGEAPEYTLE 473

Query: 472 GWLLNYSDIEFLSKGEDFNQWVSLIDAWRADSSAL---FPAKELGKSLVEKHQLIPMFHC 528
            WL   +    +     +    + +DA +  + A       + +   L+E   L P+F+ 
Sbjct: 474 QWLRCDALWPHVLSAPAYAHLQATLDAVQTQAEARDRHAGLQAIFNRLMESAVLTPLFNY 533

Query: 529 WLGISKDQCGALQNAKCNALGWFDFSQVWV 558
              IS      +   + N  GWFDF++ W+
Sbjct: 534 QYQISAPP--GVNGIRLNTRGWFDFTEAWL 561