Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 555 a.a., HTH-type transcriptional regulator SgrR from Dickeya dadantii 3937

 Score =  348 bits (892), Expect = e-100
 Identities = 204/567 (35%), Positives = 306/567 (53%), Gaps = 24/567 (4%)

Query: 1   MSSPRLRVQFETLFEHFQGQDVETQLEDVTDILFCTRRNARIVLNKMEEEGWIEWHPAAG 60
           MSSPRL+ QF  L++  QGQD  T L+++  +L C+RR+ R +LN M+++GW+ W   AG
Sbjct: 1   MSSPRLQQQFIRLWQCLQGQDTNTTLQELALLLNCSRRHIRSLLNAMQQQGWLTWQAEAG 60

Query: 61  RGKLSQLIFKRSRADVSENLARRYLNEGKIGQAFAVLDQDAAKLTQVIESYLGVQHQEGL 120
           RGK S+L F  +   + +  A   L + +I Q   ++  D   + Q++ S+LG   ++G 
Sbjct: 61  RGKRSRLSFLYTGLTLQQQRAEDLLEQDRIDQLVQLVG-DKETVRQMLLSHLGRSVRQGR 119

Query: 121 QVVRLPYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEE-QLQPDLAHAWQALSDTH 179
            ++R+ YYR +  L P   +RRSE HIARQ+FSGLT L+EE  +L PD+AH WQALS  H
Sbjct: 120 HLLRILYYRPMHNLLPGSALRRSETHIARQIFSGLTSLNEENGELLPDIAHHWQALSPLH 179

Query: 180 WRFYLRPGVRFHNGNLLTTELIVQNLWQLRLLNLFAHIDRVDSPYPWAVDVHLQKPDTRL 239
           WRFYLRP VRFH+G  LT E ++ +L +L  L LF+H+  + SP P+ +D+ L  PD  L
Sbjct: 180 WRFYLRPAVRFHHGRELTMEDVISSLSRLTALPLFSHLTDISSPTPFVLDIRLSMPDDWL 239

Query: 240 PLLLAEACAKILPAESDRNPDFDLMPVGTGPYKVVLNDEKRLVLQAFDGYFGFRPLLDRV 299
           P LL    A ILP E    PDF   P+GTGPY+VV N   +L + AFD YFG+R L+D V
Sbjct: 240 PWLLGSVPAMILPKEWQTLPDFMRQPIGTGPYQVVRNSPNQLKIAAFDDYFGYRALIDEV 299

Query: 300 EVWVIDEVHSSMVFPSLSNPMKTARGSSTEEVE----LDPGCTYLLLNRRNGVAKDEHWA 355
            +WV+ +       P +     T +G  T + E    L+ GC +LL +RR+    D    
Sbjct: 300 SIWVLPDA------PIIPACTVTLQGDDTTDNELENRLEEGCYFLLFDRRSPQMADSEVR 353

Query: 356 RYLTDKLNALNLFRLLPEEKIIELGVLPAYGLKPGWYHHSAAAQRTLPPESKELTIAYHA 415
            +L   L+ + +  L       E    PAYGL P W+H    A R  P     LT+  + 
Sbjct: 354 HWLCQVLSPVAMLGLADSPYQSEWS--PAYGLLPRWHHSPPRAVREKPVGLTHLTLTCYR 411

Query: 416 QHPMFPTVANAIKQLLSQDGITVNV--IKYEHTVVETENVDIWIKPMGIANHRDDALAGW 473
            HP +  +++ + +LL+  G+T+ +  ++++      +  D+W   +G AN         
Sbjct: 412 DHPEYEVISSIMGRLLASHGVTMTLRSLEFDAWCQGDDASDLW---LGSANFYLPLEFSL 468

Query: 474 LLNYSDIEFLSKGEDFNQWVSLIDAWRADSSALFPAKELGKSLVEKHQLIPMFHCWLGIS 533
                ++  L      ++       WR    +L    E  +SLV + Q+ P+FH WL + 
Sbjct: 469 FAMLYELPLLRHCLGDDELEHTARQWRQGQLSL---AEWCQSLVSRQQIHPLFHHWLRLQ 525

Query: 534 KDQCGALQNAKCNALGWFDFSQVWVKP 560
                +++  + N LGWFDF   W  P
Sbjct: 526 GQV--SMRGLRMNTLGWFDFKSAWFAP 550