Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., ABC transporter substrate-binding protein from Dickeya dadantii 3937

 Score = 78.2 bits (191), Expect = 7e-19
 Identities = 94/360 (26%), Positives = 154/360 (42%), Gaps = 57/360 (15%)

Query: 134 LNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSDTHWRFYLRPGVRFHNG 193
           ++PQ  +  +   +AR +F GL   +E++Q+ P LA +W+A++DT W+F LRP V+FH+G
Sbjct: 33  MDPQFYVGGANSAMARNLFDGLVNQNEKQQITPALAVSWKAVNDTTWQFTLRPNVKFHDG 92

Query: 194 NLLTTELIVQNLWQLRL---------LNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLA 244
              +   +V ++ ++ L             A I  +    P  V++  + P   L   L+
Sbjct: 93  TDFSARDVVASVKRVALAAKNSPSAYTPYVADIGEIREIDPLTVEIKTKGPAALLLNNLS 152

Query: 245 EACAKILPAESDRNPDFDLM-----PVGTGPYKVV-LNDEKRLVLQAFDGYFGFRPLLDR 298
                ILPA     P  D++      +GTGP+K V    + ++VL   D Y+G +   D 
Sbjct: 153 RIA--ILPARLADQPT-DVLNGGKDVIGTGPFKFVSYTPDDKVVLSRNDHYWGGKAEWDT 209

Query: 299 VEVWVIDEVHSSMVFPSLSNPMKTARGSSTEE-----------VELDPGCTYLLL----- 342
           V + VI    S+ +   LS  +       T +            E  PG   L L     
Sbjct: 210 VTLRVIKN-SSARIAALLSGDVDMIESVPTADRATIARQQAFATESVPGNRILYLHPDQD 268

Query: 343 ----------NRRNGVAKDE-HWARYLTDKLNALNLFRL----LPEEKIIELGVLPAYGL 387
                     + +N + K E   A  L    +AL    L    LP  +++  G  P Y  
Sbjct: 269 RDVSPFAKGDDGKNPLKKAEVRQAMSLAINRDALVQRILDGQGLPSSQLVPQG-YPGYSA 327

Query: 388 K-PGWYHHSAAAQRTLPPES--KELTIAYHAQHPMFPT---VANAIKQLLSQDGITVNVI 441
           K P   +  A A++ L         T+ +HA +  +P    +A A+ Q+ SQ GI   V+
Sbjct: 328 KIPAPVYDLAQAKQKLAAAGYPNGFTLTFHASNDRYPNDAKIAQALGQMFSQAGIKTEVV 387