Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., ABC transporter, substrate binding protein (agrocinopines A and B) from Agrobacterium fabrum C58

 Score = 58.2 bits (139), Expect = 8e-13
 Identities = 52/197 (26%), Positives = 82/197 (41%), Gaps = 24/197 (12%)

Query: 134 LNPQKPMRRSEQHIARQVFSGLTRLD--------EEEQLQPDLAHAWQALSDTHWRFYLR 185
           L P   +      I  Q+F  L   D            L P LA +W+ + +   RF LR
Sbjct: 46  LEPVNAISNVGPRIVNQIFDTLIARDFFAKGAPGNAIDLVPALAESWERIDEKSVRFKLR 105

Query: 186 PGVRFHNGNLLTTELIV-----QNLWQLRLLNLF----AHIDRVDSPY---PWAVDVHLQ 233
             V FH+G  LT + +      + LW    +       ++    D P     + V +  +
Sbjct: 106 QKVMFHDGVELTADDVAYTFSSERLWGPEAIKKIPLGKSYSLDFDEPVVEDKYTVTLRTK 165

Query: 234 KPDTRLPLLLAEACAKILPAESDRN---PDFDLMPVGTGPYKVV-LNDEKRLVLQAFDGY 289
            P   +   +A   ++I+P E  +     DF   PVGTGPYK V      R+VL+A D Y
Sbjct: 166 TPSYLIETFVASWMSRIVPKEYYKKLGAVDFGNKPVGTGPYKFVEFVAGDRVVLEANDAY 225

Query: 290 FGFRPLLDRVEVWVIDE 306
           +G +P   ++   ++ E
Sbjct: 226 WGPKPTASKITYQIVAE 242