Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., ABC transporter, substrate binding protein (peptide) from Agrobacterium fabrum C58

 Score = 62.8 bits (151), Expect = 3e-14
 Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 31/205 (15%)

Query: 147 IARQVFSGLTRLDEEEQLQPDLAHAWQALSDTH-WRFYLRPGVRFHNGNLLTTELIVQNL 205
           +  +V  GL ++  +   +P LA +W   +D   + F+LRPG+++H+G   T+  +  +L
Sbjct: 61  VGSRVIEGLLKVSFDRTFKPHLAESWDISADGKTYTFHLRPGIKWHDGQPFTSADVAFSL 120

Query: 206 WQLRLLN-----LFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILP----AESD 256
             L+  +      FA ++++D+P P  V    + P   L   L+   + I+P     E+D
Sbjct: 121 LTLKETHPRRRVTFASLEKIDTPDPLTVVAQFKTPVPFLLPALSGIASPIIPKHLYEETD 180

Query: 257 -RNPDFDLMPVGTGPYKVVLNDEKR----LVLQAFDGYFGFRPLLDRVEVWVIDEVHSSM 311
            R   ++  P+GTGPY  V  + +R    L+ +  D +    PLLD V    I +V    
Sbjct: 181 IRANPYNAKPIGTGPY--VFKEWERGSHILLERNPDYWIKDLPLLDAVVTRFIVDV---- 234

Query: 312 VFPSLSNPMKTARGSSTEEVELDPG 336
                     +ARG++ E  ++D G
Sbjct: 235 ----------SARGAAFEAGDVDVG 249