Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 54.7 bits (130), Expect = 9e-12
 Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 31/195 (15%)

Query: 131 LSMLNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSDTHWRFYLRPGVRF 190
           L  L+P      S       ++ GL R   + Q++P LA  W+ +    WRF LR GV+F
Sbjct: 34  LYSLDPYSVPSTSNLAFLNHIYEGLVRYGPDFQIEPALATEWKLIDGKAWRFTLRKGVKF 93

Query: 191 HNGNLLTTELIVQNLWQLR--------LLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLL 242
           H+G+  T + +V +  +           + +FA + +VD    + VD+ +  P +   L 
Sbjct: 94  HDGSDFTADDVVASFTRASDATSPLRGNIPVFAGVKKVDD---YTVDLEVSAPTS---LF 147

Query: 243 LAEAC------AKILPAESDRNP-DF--------DLMPVGTGPYKVVLN-DEKRLVLQAF 286
           L +        AK L   +   P DF         +   GTGP+K+     + + VL A 
Sbjct: 148 LNDITNIFIFNAKWLKDNNSEKPTDFASKVDGYTTMHTNGTGPFKLESRVPDSKTVLVAN 207

Query: 287 DGYFGFRP-LLDRVE 300
           +G++  +   LDR+E
Sbjct: 208 EGWWDQKKHNLDRIE 222