Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 511 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 70.5 bits (171), Expect = 2e-16
 Identities = 106/433 (24%), Positives = 171/433 (39%), Gaps = 60/433 (13%)

Query: 147 IARQVFSGLTRLDEEEQLQPDLAHAWQALSD-THWRFYLRPGVRFHNGNLLTTELIVQNL 205
           +A  +F GLT    + +L P LA +W+ L +    RF LR  V+FHNG       +    
Sbjct: 57  VATNIFDGLTYRGPDLKLAPGLAESWEELDEGKRIRFKLRQNVKFHNGEPFNAAAVKFTF 116

Query: 206 WQL--------RLLNLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILP---AE 254
            +L           + +  I+ VD    + VD+ L+ PD  L   LA     I+P    +
Sbjct: 117 ERLLGEQGAKGPQRSNYVAIESVDVIDDYTVDMKLKAPDPVLLTKLAGYGGMIVPPAYIK 176

Query: 255 SDRNPDFDLMPVGTGPYKVVLNDEK-RLVLQAFDGYFGFRPLLDRVEVWVIDEVHSS--- 310
                +F+L PVGTG +K V    K  + L+A   Y+G  P L  +E   I E  ++   
Sbjct: 177 EKGEDNFNLNPVGTGAFKFVSYAPKNNIKLEANPDYWGGAPKLSELEYRFIAEPSTAVAE 236

Query: 311 --------MVFPSLSNPM-KTARGSSTEEVELDPGCTY--LLLNRRNGVAKDEHWARYLT 359
                   ++ P++   M     G S  ++   PG T   L  N R+G+  D    + + 
Sbjct: 237 LQAGRVDLVIPPTIPIGMIPVIEGDSKLQIVSVPGPTVDALRFNTRDGITADPKVRKAII 296

Query: 360 DKLNALNLFRLLPEEKIIELGVLP---AYG----LKPGWYHHSAA----AQRTLPPESKE 408
             ++   + + +   +  E+       ++G    LKP  Y    A    A+  + P    
Sbjct: 297 MAVDRGTIVKSILAGQASEIASFQSALSFGYDPELKPLPYDPDGAKKLLAEAGVKP-GAA 355

Query: 409 LTIAYHAQHPMFPTVANAIKQLLSQDGITVNVIKYEHTVVETENVDIWIKPMGIANHR-D 467
           L I           VA  I   LS  GIT  +  YE  V+  +     I P G       
Sbjct: 356 LQIDIRGNDATMNEVAQVISSYLSMVGITATIKPYETNVLLND-----IIPQGKTGAMFQ 410

Query: 468 DALAGWLLNYSDIEF--LSKGEDFNQW------VSLIDAW-----RADSSALFPAKELGK 514
               GW  +Y +  +     GE +N +        L+++      RA+   +   KELG 
Sbjct: 411 QKWGGWTFDYDNTAYSMYHSGEKWNPYDKDEKLDKLLESQRPLTDRAEREKIL--KELGS 468

Query: 515 SLVEKHQLIPMFH 527
              E+   IP+++
Sbjct: 469 YTAERALEIPLYN 481