Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 58.9 bits (141), Expect = 5e-13
 Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 11/161 (6%)

Query: 122 VVRLPYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSD-THW 180
           +V L    + + L P        + I+ ++  GL R D E +  P LA +W+  +D   +
Sbjct: 51  IVTLAGLGEPTTLVPLSDSNTRTRAISTKILEGLVRFDSEFKPHPVLAESWETSADGLRY 110

Query: 181 RFYLRPGVRFHNGNLLTTELIVQNLWQLRLLN-----LFAHIDRVDSPYPWAVDVHLQKP 235
            F LR GV++H+G   T + +  +L   + +       FA++  +++P P    V L KP
Sbjct: 111 TFKLRKGVKWHDGKDFTAQDVKFSLLAFKKVGPRGRITFANLADIETPNPLTAVVVLSKP 170

Query: 236 DTRLPLLLAEACAKILPAESDRNPDFD-----LMPVGTGPY 271
              L   L      ILPA +  + +++       PVGTGP+
Sbjct: 171 APYLLRALTGGETPILPAHAYASENYNESPNGNAPVGTGPF 211