Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 59.3 bits (142), Expect = 4e-13
 Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)

Query: 120 LQVVRLPYYRQLSMLNPQKPMRRSEQHIARQVFSGLTRLDEEEQLQPDLAHAWQALSD-T 178
           L++V  P   QL  +N         Q I  +++ GL   D E   +P LA  W   +D  
Sbjct: 38  LKIVYFPEPTQLVAINTSAG---GPQFIGSKIYDGLLTYDYELSPKPSLAKEWSVSADGL 94

Query: 179 HWRFYLRPGVRFHNGNLLTTELIVQNLWQLRLLN-----LFAHIDRVDSPYPWAVDVHLQ 233
            + F+L+P  +FH+G  +T+  +  ++ +L+  +      FA+++ +D+  P    V L 
Sbjct: 95  EYVFHLQPNAKFHDGKPVTSADVEFSILRLKEAHPRGRATFANVESIDTSNPLVAKVKLS 154

Query: 234 KPDTRLPLLLAEACAKILPAE--SDRNPDFDLMP---VGTGPYKVVLND---EKRLVLQA 285
           KP   L   LA + + ++P        P  +  P   +G+GP+  VL +      ++L+ 
Sbjct: 155 KPAPGLITALASSESPVVPKHIFETFKPTDNPKPAQIIGSGPF--VLKEWVPGSHILLEK 212

Query: 286 FDGYFGF-RPLLDRVEVWVIDE 306
              Y+   RP LDRV + +I++
Sbjct: 213 NANYWDAPRPYLDRVIIRLIND 234