Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 535 a.a., oligopeptide ABC transporter substrate-binding protein from Agrobacterium fabrum C58

 Score = 55.8 bits (133), Expect = 4e-12
 Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 15/181 (8%)

Query: 146 HIARQVFSGLTRLDEEEQLQPDLAHAWQALSD-THWRFYLRPGVRFHNGNLLTTELIVQN 204
           +I+ +V  GL   D +   +P LA +W   +D   + F LRPGV++H+G   T+  +  +
Sbjct: 63  YISPKVTEGLLTYDFDLNPKPLLAKSWDVSADGLRYTFNLRPGVKWHDGKPFTSADVAFS 122

Query: 205 LWQLRLL-----NLFAHIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILP------A 253
           +  ++ +     N F ++  V++P      + L KP   L   LA A   I+P       
Sbjct: 123 ISTIKEVHPRGRNTFLNLTAVETPNELTAVLVLSKPAPYLITALAAAETPIVPKHLYEGT 182

Query: 254 ESDRNPDFDLMPVGTGPYKVV--LNDEKRLVLQAFDGYFGFRPLLDRVEVWVIDEVHSSM 311
           +   NP  +L P+GTGP+K    +     +  +  D +   RP LDR+ V  I +  +  
Sbjct: 183 KVTENP-VNLAPIGTGPFKFKEWVRGSHIVFERNADYWDAPRPYLDRLIVRFIPDASARA 241

Query: 312 V 312
           +
Sbjct: 242 I 242