Pairwise Alignments

Query, 565 a.a., SgrR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score = 72.4 bits (176), Expect = 4e-17
 Identities = 85/346 (24%), Positives = 144/346 (41%), Gaps = 35/346 (10%)

Query: 152 FSGLTRLDEEEQLQPDLAHAWQALSDTHWRFYLRPGVRFHNGNLLTTELIVQNLWQLRLL 211
           + GL R+  + +L+  LA +W+      W F LR GV+F NG        V  L  L   
Sbjct: 54  YEGLVRIGFDMRLEASLAESWKQTEPKVWEFKLRKGVKFQNGEDFNAAAAVNALTLLLKA 113

Query: 212 NLFA------HIDRVDSPYPWAVDVHLQKPDTRLPLLLAEACAKILPAESDRNPDFDLMP 265
           ++ A       I  V++     V V   +P   LP  LA     IL   + ++   + + 
Sbjct: 114 SVPARAFSPKQIAGVEAVGDDVVKVTTIEPSVLLPAQLASPATAILAPSAYKDGKINPIG 173

Query: 266 VGTGPYKVV-LNDEKRLVLQAFDGYFGFRPLLDRVEVWVI------------DEVHSSMV 312
             TGP+++  ++  + +V++A  GY+G  P LD   V  +             EV  S +
Sbjct: 174 TCTGPFEITEVDPNQYMVMKANHGYWGGMPKLDGGRVNFVPDADTRATQIRTGEVQISRL 233

Query: 313 FPSLS-NPMKTARGSSTEEVELDPGCTYLLLNRRNGVAKDEHWARYLTDKLNALNLFRLL 371
            P  S   +++ +G     + + P  T LLLN      KD+     +   ++A  +   +
Sbjct: 234 VPPWSIKTIESTKGVKVAAISV-PRITELLLNNSRPPFKDKKVREAVRAAIDAAGIASSI 292

Query: 372 PEEKIIELGVLPAYGL-----KPGWYHHSAAAQRTL-----PPESKELTIAYHAQHPMFP 421
            EEK+    +  A G      +P   +  A A+  L      P S ++TI  +       
Sbjct: 293 YEEKVKSASMPFAPGQPWAAEEPTSTYDVAKAKSLLKEAGIAPGSLKVTILAYTMKTELK 352

Query: 422 TVANAIKQLLSQDGITVNVIKYEHTVVETE----NVDIWIKPMGIA 463
            VA  I+  L + GI V+V   E++ +E +    N D+ +   G A
Sbjct: 353 DVAAIIQAQLEEIGIKVDVRVAEYSAIEPDLLAGNFDMVLLSRGYA 398