Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., HTH-type transcriptional regulator YhaJ from Pseudomonas lactucae CFBP13502

 Score =  120 bits (301), Expect = 4e-32
 Identities = 78/255 (30%), Positives = 134/255 (52%), Gaps = 5/255 (1%)

Query: 5   ITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEA 64
           +TL+    L A+   G FA AA  L+R+ SS+SY + +++  L + +    G +A  T+A
Sbjct: 6   VTLDQWRTLQAVVDHGGFAQAAEALHRSQSSVSYTVARMQDQLGVPLLRIDGRKAVLTDA 65

Query: 65  GKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLFPMVEALGNISK-T 123
           G+++L R R ++    +L + A  +  GWE ++ + +D   P A L   + A    S+  
Sbjct: 66  GEVLLRRSRQLVKNASQLEDLAHHMEQGWEAEVRLVVDAAYPNARLVRALSAFMPQSRGC 125

Query: 124 RVRIQDEILAGCWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAPTHYVHRRS 183
           RVR+++E+L+G  E L  G ADL IC    ++P  +  E +  ++ + VA P H +HR +
Sbjct: 126 RVRLREEVLSGVEELLIEGVADLAICG--FSIPGYLGTE-MSDVEFVAVAHPEHALHRMN 182

Query: 184 GEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTLPL 243
            E + +  E    + I D+ R+QP   V  L  + R TV +L      + +GLG   LP 
Sbjct: 183 RELSFQDLESQMQVVIRDSGRQQP-RDVGWLGAEQRWTVGSLATAASFVGSGLGFAWLPR 241

Query: 244 QVAQPYIDKGELKAI 258
            + +  + +G LK +
Sbjct: 242 HMIERELAEGVLKQL 256