Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., predicted DNA-bindng transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score = 80.1 bits (196), Expect = 6e-20
 Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 10/290 (3%)

Query: 1   MLSPITLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRAN 60
           M S  T E L       R GSF+ AA EL    S++SY I+++E  LD+++F RS     
Sbjct: 1   MNSIFTEENLLAFTTAARFGSFSKAAEELGLTTSAISYTIKRMETGLDVVLFTRSTRSIE 60

Query: 61  FTEAGKLILERGRAILAATEKLVNDATLLANGWELDITIALDGIV----PAANLFPMVEA 116
            TE+G+    +   +L     +      ++ G E  + I ++ ++      A L  +++ 
Sbjct: 61  LTESGRYFFRKATDLLNDFYAIKRRIDTISQGIEARVRICINQLLYTPKHTARLLQVLKK 120

Query: 117 LGNISKTRVRIQDEILAGCWEALATGRADLLI-CPRIEALPQDVKAETIGTMKMIWVAAP 175
                  ++ +  E+  G W+A+   +A++ I  P        +    IG ++  +  AP
Sbjct: 121 --QFPTCQITVTTEVYNGVWDAIINNQANIAIGAPDTLLDGGGIDYTEIGAIRWAFAIAP 178

Query: 176 THYVHRRSGEFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAG 235
            H +        E     Y  I + DTA         +L  Q  + V + + KC+  + G
Sbjct: 179 DHPLAFVPEPIAESQLRLYPNIMVEDTAHTINKKVGWLLHGQESILVPDFNTKCQCQILG 238

Query: 236 LGIGTLPLQVAQPYIDKGEL--KAIHGSEDLEMDIVLAWRRNQMGEAKSW 283
            GIG LP  + +  + +  L  + IH     +  ++LA + +  G+   W
Sbjct: 239 EGIGFLPDYMVREAMTQSLLVTRQIHNPRQ-DSRMLLATQHSATGQVTQW 287