Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., HTH-type transcriptional activator AllS from Escherichia coli ECRC62

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 71/277 (25%), Positives = 127/277 (45%), Gaps = 4/277 (1%)

Query: 8   EALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEAGKL 67
           E L    A+   GSF+ AA  L +  +++SY+I+ LE++  + +F R+      T AG+ 
Sbjct: 5   ETLRTFIAVAETGSFSKAAERLCKTTATISYRIKLLEENTGVALFFRTTRSVTLTAAGEH 64

Query: 68  ILERGRAILAATEKLVNDATLLANGWELDITIALDGIV--PAANLFPMVEALGNISKTRV 125
           +L + R  L+  E + ++   + +G E  + I ++ ++  P A    +         T+ 
Sbjct: 65  LLSQARDWLSWLESMPSELQQVNDGVERQVNIVINNLLYNPQAVAQLLAWLNERYPFTQF 124

Query: 126 RIQDEILAGCWEALATGRADLLI-CPRIEALPQDVKAETIGTMKMIWVAAPTHYVHRRSG 184
            I  +I  G W++L      L I     EAL      + +G+++  +V A  H +     
Sbjct: 125 HISRQIYMGVWDSLLYEGFSLAIGVTGTEALANTFSLDPLGSVQWRFVMAADHPLANVEE 184

Query: 185 EFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTLPLQ 244
              E    ++ A+ I D+AR         L  Q  + V +++ K  A +AG+GIG LP  
Sbjct: 185 PLTEAQLRRFPAVNIEDSARTLTKRVAWRLPGQKEIIVPDMETKIAAHLAGVGIGFLPKS 244

Query: 245 VAQPYIDKGEL-KAIHGSEDLEMDIVLAWRRNQMGEA 280
           + Q  ID  +L   +  +      + LAWR+   G+A
Sbjct: 245 LCQSMIDNQQLVSRVIPTMRPPSPLSLAWRKFGSGKA 281