Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 310 a.a., DNA-binding transcriptional activator PunR from Escherichia coli ECRC62

 Score =  137 bits (346), Expect = 2e-37
 Identities = 81/283 (28%), Positives = 144/283 (50%), Gaps = 3/283 (1%)

Query: 9   ALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEAGKLI 68
           +L ++DA+ R GSF+AAA EL+R PS++SY +++LE+ L + +F+R       T AG   
Sbjct: 6   SLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWF 65

Query: 69  LERGRAILAATEKLVNDATLLANGWELDITIALDGIV-PAANLFPMVEALGNISKTRVRI 127
           L+ GR+++   +        +ANGW   + IA+D IV P      +V+   +     + +
Sbjct: 66  LKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLV 125

Query: 128 QDEILAGCWEALATGRADLLI-CPRIEALPQDVKAETIGTMKMIWVAAPTHYVHRRSGEF 186
             E+  G W+AL+ GR +L I   R   +        +G +    V A  H +    G F
Sbjct: 126 FQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPF 185

Query: 187 NEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTLPLQVA 246
           +++    + ++   DT+R  P     +L  Q R+ V + ++    + AGL IG +P   A
Sbjct: 186 SDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFA 245

Query: 247 QPYIDKGELKAIHGSEDL-EMDIVLAWRRNQMGEAKSWCIQYL 288
           +P++++G+  A+       +    L W++N M  A +W ++YL
Sbjct: 246 KPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYL 288