Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 307 a.a., HTH-type transcriptional activator AllS from Alteromonas macleodii MIT1002

 Score = 98.6 bits (244), Expect = 2e-25
 Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 5/251 (1%)

Query: 6   TLEALHILDAIERRGSFAAAANELNRAPSSLSYQIQKLEQDLDLMIFDRSGHRANFTEAG 65
           TLE   +  A+   G F  AA E++++ SS+ + +QKLE  + + +F+  G +   +  G
Sbjct: 5   TLEQWRMFKAVVDAGGFNQAATEVHKSQSSVHHAVQKLENAIGVSLFENIGRKVQLSPQG 64

Query: 66  KLILERGRAILAATEKLVNDATLLANGWELDITIALDGIVPAANLF-PMVEALGNISKTR 124
           +L+  R   +L+   KL   A  L +G E  + IA+D I P+  L+  + +        R
Sbjct: 65  ELMYRRASFLLSEAHKLEAVANSLKSGTETTLRIAVDIIFPSELLYNVLAKVSAEFPLLR 124

Query: 125 VRIQDEILAGCWEALATGRADLLICPRIEALPQDVKAETIGTMKMIWVAAPTHYVHRRSG 184
           + I++ +L+G    L+ G+ DL I P   +   +  +E +  ++   VA   H +H+   
Sbjct: 125 IEIEETVLSGANSLLSNGKVDLGISPFAFS---NGFSEDLCEIEFAAVAHADHPLHQLDR 181

Query: 185 EFNEEAREKYRAIAIADTAREQPAMSVNILQRQPRLTVSNLDAKCKALVAGLGIGTLPLQ 244
               E  + YR I + D++ E+ A  V  L  + R TVS++      +  GLG   LP+ 
Sbjct: 182 TLTLEDLKAYRQIVVRDSSAERKA-DVGWLGAEQRWTVSHVRTSLDIITQGLGFAWLPIA 240

Query: 245 VAQPYIDKGEL 255
           + +  ++ G L
Sbjct: 241 IIKDELEDGTL 251