Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., D-alanine--D-alanine ligase from Pseudomonas simiae WCS417

 Score =  105 bits (261), Expect = 2e-27
 Identities = 93/325 (28%), Positives = 153/325 (47%), Gaps = 30/325 (9%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E E+SL S N +   L+ +   +   +++               D   A 
Sbjct: 20  VAVLFGGKSAEREVSLKSGNAVLDALQ-SAGVNAFGIDVG--------------DDFIAR 64

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
           L ++K    ID     +HG  GE G +Q +LE AGIPY G G  ASA + +K+ +K  + 
Sbjct: 65  LQAEK----IDRAFIILHGRGGEDGSMQGLLECAGIPYTGSGVLASALAMDKLRTKQVWH 120

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185
           +L IP TP   +  +    I  AK+       + VK A +GSS+G  KV +  ++  A +
Sbjct: 121 SLGIP-TPRHSVLCSEDDCISAAKEL---GLPLIVKPAHEGSSIGMAKVNSAAELIDAWK 176

Query: 186 AAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHAR 245
           AA  +  QVLVEQ ++  E  ++   + G++    P   +    TFY Y+ KY A S  +
Sbjct: 177 AASTYDSQVLVEQWIQGPEYTIAT--LRGQVL---PPIALGTPHTFYDYDAKYLA-SDTQ 230

Query: 246 TVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPIS 305
             +       K +EL+   A +    + +   +R D     +G  +  EVNT PGMT  S
Sbjct: 231 YRIPCGLDASKEQELMDLTA-KACEALGIAGWARADVMQDDQGDFWFLEVNTAPGMTDHS 289

Query: 306 MFPKMLEHNGHRFSEFLVQCVTNTL 330
           + P      G  F + ++  + +++
Sbjct: 290 LVPMAARAAGLDFQQLVLAILADSI 314