Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Variovorax sp. SCN45

 Score = 92.0 bits (227), Expect = 2e-23
 Identities = 88/332 (26%), Positives = 138/332 (41%), Gaps = 29/332 (8%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTP-EFHVIRVEMKKEGWFSEQGALVYLDTNSA 64
           + +L GG S+E EISL+S   + + L     + H      ++      +G          
Sbjct: 12  VAVLFGGSSAEREISLMSGTGVLEALRSRGVDAHAFDPSQRELADLKREG---------- 61

Query: 65  TLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKI-TSKLW 123
                   +   FV   +HG  GE G +Q  LEL GIPY G G  AS+ + +K+ T ++W
Sbjct: 62  --------FARCFVA--LHGRHGEDGTVQGALELLGIPYTGSGVMASSVAMDKVMTKRIW 111

Query: 124 Y-DALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAP 182
             D L  P    L   Q +   I       G    + VK  R+GSS+G  KV    Q+  
Sbjct: 112 QADGLPTPKYVRLAFDQQSREQIMAVPDVLGL--PLIVKPPREGSSIGVTKVEGYSQMQD 169

Query: 183 AIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANS 242
           AI  +  +   VL E+ ++  E+  +               + APEG  Y Y+ KY  + 
Sbjct: 170 AITLSAKYDADVLCEEFIEGEEVTCAVLGHGLDARALPVVRIAAPEGA-YDYQNKYFTDD 228

Query: 243 HARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFL-TQEGQIYLNEVNTFPGM 301
                       E+H+  IQ  A   +  +  R   R D  +   + + +L E+NT PGM
Sbjct: 229 VKYQCPSGLPDAEEHE--IQRIALAAYRTLGCRGWGRADVMIRASDRKPFLLEMNTSPGM 286

Query: 302 TPISMFPKMLEHNGHRFSEFLVQCVTNTLVNA 333
           T  S+ P      G  + E  V+ + +  ++A
Sbjct: 287 TSHSLVPMSARAAGIAYEELCVRVLASATLDA 318