Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., D-alanine--D-alanine ligase A from Pseudomonas putida KT2440

 Score =  146 bits (369), Expect = 7e-40
 Identities = 110/337 (32%), Positives = 164/337 (48%), Gaps = 28/337 (8%)

Query: 1   MTKTTILLLCGGGSSEHEISLVSANYIQQQL-ELTPEFHVIRVEMKKEGWFSEQGALV-- 57
           M +  I L+ GG SSEH ++L SA  I   L  L    H + ++  +EG +  QG     
Sbjct: 1   MKQNVIALVFGGRSSEHSVALRSAATIHAALMALGHRVHCVGID--REGNWRYQGEPCQF 58

Query: 58  ----------------YLDTNSATLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGI 101
                           +   +  T  S      ID + P +HG  GE G IQ +  + G+
Sbjct: 59  PGAVDRSAPLISIRPGHRSLSYTTQESGTVEIGIDLLFPALHGRWGEDGTIQGLAAMCGL 118

Query: 102 PYLGCGPEASANSFNKITSKLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVK 161
           P +G G   SA + +K  +K    +  +   P+L +    P   ++  +  G   ++FVK
Sbjct: 119 PCVGSGVLGSAMAMDKDVTKRMVQSAGLVVVPWLAMNSMRPW--EELVECLGS-STLFVK 175

Query: 162 AARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKP 221
            A  GSS+G  +V+   + A A   A     +VLVE AV  RE+E    E+   L  S  
Sbjct: 176 PATSGSSIGVSRVSNALEYAAAFAIAAREDTKVLVEAAVCGREIECGVLELEEGLMASVV 235

Query: 222 GEVIAPEG-TFYSYEEKYSANSHARTVLEAENLTEKH-KELIQTYAERVFIHMKLRHLSR 279
           GE+I  EG  +Y Y+ KY +NS   T L   +L        IQ  + + F  ++L+  +R
Sbjct: 236 GEIIKKEGHAYYDYQAKYDSNSV--TGLRVPSLLPPDIVARIQALSVQAFRCLELKGYAR 293

Query: 280 IDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGH 316
           +DFFLT+EG+I LNE+NT PG T  SM+PKM E +G+
Sbjct: 294 VDFFLTEEGEIILNEINTLPGFTSASMYPKMFECSGY 330