Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 318 a.a., D-alanine--D-alanine ligase B from Pseudomonas putida KT2440

 Score =  106 bits (264), Expect = 9e-28
 Identities = 92/326 (28%), Positives = 149/326 (45%), Gaps = 32/326 (9%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E E+SL S   +   L  T    V+ +++               D   A 
Sbjct: 20  VAVLYGGKSAEREVSLKSGAAVIDALS-TAGVDVVAIDVG--------------DDLLAR 64

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
           L S+K    ID     +HG  GE G +Q +LE  GIPY G G  ASA + +K+ +K  + 
Sbjct: 65  LQSEK----IDRAFIILHGRGGEDGSMQGLLECLGIPYTGSGILASALAMDKLRTKQVWQ 120

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185
           +L IP   +  L   +       +  F     + VK A +GSS+G  KV +  ++  A +
Sbjct: 121 SLGIPTPRHAVLASESDCLQASTELGF----PLIVKPAHEGSSIGMAKVNSTQELVAAWQ 176

Query: 186 AAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSAN-SHA 244
            A  +  QVLVEQ +   E  ++   + G++    P   +     FY Y+ KY  N +  
Sbjct: 177 DAAKYDSQVLVEQWIHGPEFTIAV--LRGQVL---PPIALGTPHVFYDYDAKYIVNDTQY 231

Query: 245 RTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPI 304
           R     +++  K +ELI   A R    + +    R+D    ++G+ +L EVNT PGMT  
Sbjct: 232 RIPCGLDSV--KEQELIDLTA-RACDAIGIEGWGRLDVMQDEQGRFWLLEVNTAPGMTDH 288

Query: 305 SMFPKMLEHNGHRFSEFLVQCVTNTL 330
           S+ P      G  F + ++  +  ++
Sbjct: 289 SLVPMAARAAGLDFQQLVLAILAESV 314