Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., D-alanine--D-alanine ligase (EC 6.3.2.4) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 89/332 (26%), Positives = 144/332 (43%), Gaps = 35/332 (10%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTP-EFHVIRVEMKKEGWFSEQGALVYLDTNSA 64
           + +L GG S+E E+SL+S   +   L+    + H      ++ G    +G          
Sbjct: 11  VAVLMGGRSAEREVSLMSGKGVLAALQSKGVDAHAFDPAEREMGELKREG---------- 60

Query: 65  TLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKI-TSKLW 123
                   +   F+   +HG  GE G +Q  LEL GIPY G G  AS+ + +K+ T ++W
Sbjct: 61  --------FQRCFIA--LHGRFGEDGTVQGALELMGIPYTGPGVMASSVAMDKLMTKRIW 110

Query: 124 Y-DALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGS-IFVKAARQGSSVGCYKVTTEDQIA 181
             + L  P             S ++   AF   GS + VK  R+GS++G  KVT+E Q A
Sbjct: 111 IAEGLATP-------AWRQVHSAEETVAAFKALGSPMIVKPVREGSTIGLTKVTSEAQCA 163

Query: 182 PAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSAN 241
            A E A      V+ EQ +   E+                  ++APEG  Y Y+ KY  +
Sbjct: 164 AAYELAAKQDPLVMCEQFIAGDEVTCPVLGTGANAKALPVIRIVAPEGN-YDYQNKYFTD 222

Query: 242 SHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFL-TQEGQIYLNEVNTFPG 300
                 L    L E  +  IQ    + ++ +  R  SR D  +  +  + +L E+NT PG
Sbjct: 223 D--TKYLVPCGLPEGEEAAIQALVLKAYLTLDCRGWSRADVMIDAKTRKPWLLEINTSPG 280

Query: 301 MTPISMFPKMLEHNGHRFSEFLVQCVTNTLVN 332
           MT  S+ P   + +G  + +  V  + +  ++
Sbjct: 281 MTGHSLVPMSAKASGLSYEDLCVALLASAALD 312