Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 305 a.a., D-alanine--D-alanine ligase from Magnetospirillum magneticum AMB-1

 Score = 84.7 bits (208), Expect = 3e-21
 Identities = 93/324 (28%), Positives = 141/324 (43%), Gaps = 40/324 (12%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E ++SL S     + LE    F V               ALV  D N A 
Sbjct: 5   VTVLMGGASAERDVSLRSGAAAAKALEQAG-FEV---------------ALVDCDRNPAE 48

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
           L         D V   +HG  GE G +Q +L L G+PY   G  ASA + +K  ++  + 
Sbjct: 49  LVRAITETRPDVVFNALHGRFGEDGCVQGVLNLLGVPYTHSGLLASAAAMDKAFARALFA 108

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185
           +  IP      +T+   +  D   + F       VK   +GSSVG + +  ++Q +P  +
Sbjct: 109 SAGIPVAEGRVITRTDRNGPDPLPRPF------VVKPLNEGSSVGVF-IVRDNQPSPLPD 161

Query: 186 AAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHAR 245
             F  +++VLVE  +  REL  +         +    E+ +  G FY YE KY A   +R
Sbjct: 162 WPFD-ADEVLVESFIPGRELTAAVMGDRALGVL----EITSDHG-FYDYEAKY-APGGSR 214

Query: 246 TVLEAENLTEKHKELIQTYAERVFIHMKL--RHLSRIDFFLT-----QEGQIYLNEVNTF 298
            ++ A      + E  +     V  H  L  R +SR D         Q  ++ + EVNT 
Sbjct: 215 HLMPAPIPEADYAEACRL---AVAAHKALGCRGVSRADLRYDDTVPGQPPRLVMLEVNTQ 271

Query: 299 PGMTPISMFPKMLEHNGHRFSEFL 322
           PGMT  S+ P+M  + G  F E +
Sbjct: 272 PGMTATSLVPEMAAYQGITFPELV 295