Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., D-alanine--D-alanine ligase A (EC 6.3.2.4) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  148 bits (373), Expect = 2e-40
 Identities = 103/351 (29%), Positives = 172/351 (49%), Gaps = 29/351 (8%)

Query: 1   MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYL- 59
           M K  + ++ GG S+EHE+SL SA  I   ++ T  F V+ + + K G +    A  YL 
Sbjct: 1   MAKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKT-RFDVVLLGIDKAGQWHVNDAENYLQ 59

Query: 60  ---DTNSATLNSDKASYP---------------------IDFVVPCIHGFPGETGDIQSM 95
              D     L     S                       +D + P +HG  GE G +Q M
Sbjct: 60  NADDPAHIALRPSAISLAQVPGKHQHQLINAQNGQPLPTVDVIFPIVHGTLGEDGSLQGM 119

Query: 96  LELAGIPYLGCGPEASANSFNKITSKLWYDALDIPNTPYLFLTQNTPSSIDKAKQAFGHW 155
           L +A +P++G    +SA   +K  +K       +   P++ LT+    +   A+      
Sbjct: 120 LRVANLPFVGSDVLSSAACMDKDVAKRLLRDAGLNIAPFITLTRTNRHAFSFAEVESRLG 179

Query: 156 GSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGK 215
             +FVK A QGSSVG  KV  E Q   A+  AF F  +V+VEQ +K RE+E +    N  
Sbjct: 180 LPLFVKPANQGSSVGVSKVANEAQYQQAVALAFEFDHKVVVEQGIKGREIECAVLG-NDN 238

Query: 216 LYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLR 275
              S  GE++     FY+Y+ KY  ++ A+ V+ A+ +  +  + I+  A + +  +   
Sbjct: 239 PQASTCGEIVL-NSEFYAYDTKYIDDNGAQVVVPAQ-IPSEVNDKIRAIAIQAYQTLGCA 296

Query: 276 HLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCV 326
            ++R+D FLT + ++ +NE+NT PG T ISM+PK+ + +G  +++ + + +
Sbjct: 297 GMARVDVFLTADNEVVINEINTLPGFTNISMYPKLWQASGLGYTDLISRLI 347