Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., D-alanylalanine synthetase (NCBI) from Escherichia coli BW25113

 Score =  125 bits (314), Expect = 1e-33
 Identities = 104/323 (32%), Positives = 145/323 (44%), Gaps = 31/323 (9%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVY-LDTNSA 64
           I +L GG S+E E+SL S   +   L                    E G   Y +D    
Sbjct: 5   IAVLLGGTSAEREVSLNSGAAVLAGLR-------------------EGGIDAYPVDPKEV 45

Query: 65  TLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWY 124
            +   K S     V   +HG  GE G +Q MLEL G+PY G G  ASA S +K+ SKL +
Sbjct: 46  DVTQLK-SMGFQKVFIALHGRGGEDGTLQGMLELMGLPYTGSGVMASALSMDKLRSKLLW 104

Query: 125 DALDIPNTPYLFLT--QNTPSSIDKAKQAFGHWG-SIFVKAARQGSSVGCYKVTTEDQIA 181
               +P  P++ LT  +      DK        G  + VK +R+GSSVG  KV  E+ + 
Sbjct: 105 QGAGLPVAPWVALTRAEFEKGLSDKQLAEISALGLPVIVKPSREGSSVGMSKVVAENALQ 164

Query: 182 PAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSAN 241
            A+  AF   E+VL+E+ +   E  V+   + G+  +  P   I P GTFY YE KY   
Sbjct: 165 DALRLAFQHDEEVLIEKWLSGPEFTVA---ILGEEIL--PSIRIQPSGTFYDYEAKYL-- 217

Query: 242 SHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGM 301
           S          L    +  +Q    + +  +  +   RID  L  +GQ YL E NT PGM
Sbjct: 218 SDETQYFCPAGLEASQEANLQALVLKAWTTLGCKGWGRIDVMLDSDGQFYLLEANTSPGM 277

Query: 302 TPISMFPKMLEHNGHRFSEFLVQ 324
           T  S+ P      G  FS+ +V+
Sbjct: 278 TSHSLVPMAARQAGMSFSQLVVR 300