Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., D-alanine--D-alanine ligase from Enterobacter asburiae PDN3

 Score =  124 bits (311), Expect = 3e-33
 Identities = 104/328 (31%), Positives = 152/328 (46%), Gaps = 41/328 (12%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYL-DTNSA 64
           I +L GG S+E E+SL S   +   L                    E G   +L D    
Sbjct: 5   IAVLSGGTSAEREVSLNSGAAVLAGLR-------------------EGGVNAHLVDPKEV 45

Query: 65  TLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWY 124
            +   KA    D V   +HG  GE G +Q +L+L G+PY G G  ASA S +K+ SKL +
Sbjct: 46  DVTQLKAM-GFDKVFIALHGRGGEDGTLQGLLDLIGMPYTGSGVMASAISMDKLRSKLLW 104

Query: 125 DALDIPNTPYLFLTQ-----NTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQ 179
               +P  P++ LT+       P S++      G    + VK +R+GSSVG  KV   + 
Sbjct: 105 QGAGLPVAPWVALTRREFELGLPDSVNTRIAELGL--PVIVKPSREGSSVGMSKVDKAED 162

Query: 180 IAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYS 239
           ++ A+  AF   E+VL+E+ +   E  V+   M G+  +  P   I P GTFY YE KY 
Sbjct: 163 LSSALALAFQHDEEVLIEKWLSGPEFTVA---MLGEEIL--PSIRIQPAGTFYDYEAKYL 217

Query: 240 ANS---HARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVN 296
           ++         LEAE   +     +Q+   + +  +  +   RID     +GQ YL E N
Sbjct: 218 SDETQYFCPCGLEAEREAD-----LQSLVLKAWHVLGCQGWGRIDVMQDSDGQFYLLEAN 272

Query: 297 TFPGMTPISMFPKMLEHNGHRFSEFLVQ 324
           T PGMT  S+ P      G  FS+ +V+
Sbjct: 273 TSPGMTSHSLVPMAARQAGMSFSQLVVR 300