Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., D-alanine--D-alanine ligase from Escherichia coli ECRC62

 Score =  155 bits (391), Expect = 2e-42
 Identities = 109/358 (30%), Positives = 182/358 (50%), Gaps = 43/358 (12%)

Query: 1   MTKTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLD 60
           M K  + ++ GG S+EHE+SL SA  I   ++ +  F V+ + + K+G +    A  YL 
Sbjct: 1   MEKLRVGIVFGGKSAEHEVSLQSAKNIVDAIDKS-RFDVVLLGIDKQGQWHVSDASNYL- 58

Query: 61  TNSATLNSDKASY-------------------------------PIDFVVPCIHGFPGET 89
                LN+D  ++                                +D +   +HG  GE 
Sbjct: 59  -----LNADDPAHIALRPSATSLAQVPGKHEHQLIDAQNGQPLLTVDVIFAIVHGTLGED 113

Query: 90  GDIQSMLELAGIPYLGCGPEASANSFNK-ITSKLWYDALDIPNTPYLFLTQNTPSSIDKA 148
           G +Q ML +A +P++G    ASA   +K +T +L  DA  +   P++ LT+    +I  A
Sbjct: 114 GSLQGMLRVANLPFVGSDVLASAACMDKDVTKRLLRDA-GLNIAPFITLTRANRHNISFA 172

Query: 149 KQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVS 208
           +        +FVK A QGSSVG  KVT+E+Q A A++ AF F  +V+VEQ +K RE+E +
Sbjct: 173 EVESKLGLPLFVKPANQGSSVGVSKVTSEEQYAIAVDLAFEFDHKVIVEQGIKGREIECA 232

Query: 209 AYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHARTVLEAENLTEKHKELIQTYAERV 268
               N     S  GE++     FY+Y+ KY     A+ V+ A  +  +  + I+  A + 
Sbjct: 233 VLG-NDNPQASTCGEIVL-TSDFYAYDTKYIDEDGAKVVVPAA-IAPEINDKIRAIAVQA 289

Query: 269 FIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPISMFPKMLEHNGHRFSEFLVQCV 326
           +  +    ++R+D FLT E ++ +NE+NT PG T ISM+PK+ + +G  +++ + + +
Sbjct: 290 YQTLGCAGMARVDVFLTPENEVVINEINTLPGFTNISMYPKLWQASGLGYTDLITRLI 347