Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., D-alanine--D-alanine ligase from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  148 bits (373), Expect = 2e-40
 Identities = 95/332 (28%), Positives = 167/332 (50%), Gaps = 18/332 (5%)

Query: 3   KTTILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWF--SEQGALVYLD 60
           K  I L+ GG + E  +SL SA  ++ Q++    + V ++ ++KE WF  +E G    +D
Sbjct: 2   KKKIALVTGGFTGESVVSLKSAAVVETQID-RERYDVYKIIIEKENWFYAAEDGTPSLVD 60

Query: 61  TNSATLNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITS 120
            N  ++  D      D V   +HG PGE G +    ++ G+PY  C    SA + NK  +
Sbjct: 61  LNDFSIQVDGKKVTFDGVFNILHGSPGEDGKLAGYFDMVGLPYTTCDALTSAITMNKGYT 120

Query: 121 KLWY---DALDIPNTPYLFLT--QNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVT 175
           K      + L++ N+  LF    +NT   ID+    +      FVK    GSS+G  KV 
Sbjct: 121 KAIVQDIEGLEVANSLQLFKNSPKNTQRVIDELTLPY------FVKPNNGGSSIGMSKVK 174

Query: 176 TEDQIAPAIEAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYE 235
           +E ++  A++ AF    QVL+E+ V  RE  +  Y +NG++ +    E+++ +  F+ +E
Sbjct: 175 SEGEVQEALDKAFAEDNQVLIEEFVSGREFSIGMYMVNGEVIVLPATEIVSSK-EFFDFE 233

Query: 236 EKYSANSHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQE-GQIYLNE 294
            KY+A       +    ++E+    ++  A +V++ +  +   R+D+FL +E G+I+  E
Sbjct: 234 AKYTAG--VTEEITPGRMSEEEVNRVREVARKVYLKLNCKGAVRMDYFLEKETGKIFFIE 291

Query: 295 VNTFPGMTPISMFPKMLEHNGHRFSEFLVQCV 326
           +NT PG T  S+  + +   G    EF  + +
Sbjct: 292 INTVPGQTETSLISQQVRAIGKTVKEFYTEII 323