Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., D-alanine--D-alanine ligase from Alteromonas macleodii MIT1002

 Score =  113 bits (282), Expect = 7e-30
 Identities = 91/325 (28%), Positives = 140/325 (43%), Gaps = 28/325 (8%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E E+SL S N +   L                     QG   +    +  
Sbjct: 22  VAVLLGGDSAEREVSLNSGNAVLNAL-------------------LRQGVDAFAFDPAER 62

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
             +D     +D  +  +HG  GE G +Q  L+   IPY G     SA + +KI +K  + 
Sbjct: 63  PLTDLIDLNVDRALIMLHGRGGEDGSMQGALQFLKIPYTGSRVLGSALAMDKIHTKQVWQ 122

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGS-IFVKAARQGSSVGCYKVTTEDQIAPAI 184
           +L +P   Y  +         K        G+ + VK AR+GSS+G  +VT+  Q+  AI
Sbjct: 123 SLGLPTAKYE-IADKRHFEAGKCSAIMDKLGNEVMVKPAREGSSIGMARVTSAKQLETAI 181

Query: 185 EAAFGFSEQVLVEQAVKPRELEVSAYEMNGKLYISKPGEVIAPEGTFYSYEEKYSANSHA 244
           + AF +  QVL+EQ +   E  VS  +       + P   ++   TFY Y  KY  N+  
Sbjct: 182 QDAFKYDNQVLLEQYIDGPEFTVSVLQGQ-----ALPSIRMSTPHTFYDYAAKYQDNT-- 234

Query: 245 RTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGMTPI 304
                   L+E+ +  +   A R F  +      RID     + Q YL E NT PGMT  
Sbjct: 235 TEYYCPSGLSEEQEAQLAKLASRAFDAISGSGWGRIDVMQDNQRQFYLLEANTVPGMTEK 294

Query: 305 SMFPKMLEHNGHRFSEFLVQCVTNT 329
           S+ PK  +  G  F E ++  ++ +
Sbjct: 295 SLVPKAAKVAGLTFDELVLSILSTS 319