Pairwise Alignments

Query, 334 a.a., D-alanine--D-alanine ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., D-alanine--D-alanine ligase from Acinetobacter radioresistens SK82

 Score =  115 bits (288), Expect = 1e-30
 Identities = 94/329 (28%), Positives = 155/329 (47%), Gaps = 38/329 (11%)

Query: 6   ILLLCGGGSSEHEISLVSANYIQQQLELTPEFHVIRVEMKKEGWFSEQGALVYLDTNSAT 65
           + +L GG S+E E+SL S   + + L        IR  ++ E +  ++  +  L      
Sbjct: 10  VAVLLGGKSAEREVSLDSGRAVLEAL--------IRSGVEAEAFDPQERCVTEL------ 55

Query: 66  LNSDKASYPIDFVVPCIHGFPGETGDIQSMLELAGIPYLGCGPEASANSFNKITSKLWYD 125
           +N D+A     F+V  +HG  GE G IQ +LE   IPY G G + SA   +KI +K  + 
Sbjct: 56  VNYDRA-----FIV--LHGRGGEDGQIQGVLEWLNIPYTGTGVQGSAIGMDKIKTKQVWQ 108

Query: 126 ALDIPNTPYLFLTQNTPSSIDKAKQAFGHWGSIFVKAARQGSSVGCYKVTTEDQIAPAIE 185
             ++P  P+  ++++  +  D+   + G      +K   +GSS+G  KV   +  A A+ 
Sbjct: 109 GSELPTAPHRIVSKDADA--DEVIASLGL--PFIIKPVHEGSSIGMSKVEKPEDFAEALA 164

Query: 186 AAFGFSEQVLVEQAVKPRELEVSAYEMNGK----LYISKPGEVIAPEGTFYSYEEKYSAN 241
            A      V+ E+ +  RE  +    +NG+    + +  P +V      FY YE KY+ N
Sbjct: 165 KATEHDAVVMAEKWINGREFTIVL--LNGQALPVIRLEPPKDV-----AFYDYEAKYNRN 217

Query: 242 SHARTVLEAENLTEKHKELIQTYAERVFIHMKLRHLSRIDFFLTQEGQIYLNEVNTFPGM 301
                +     L+E  ++ +Q  A R F  +  +   RID    ++G  +L EVNT PGM
Sbjct: 218 DVQYGI--PCGLSEAEEKTLQELALRAFQAVGCKGWGRIDAMQDEQGNFWLLEVNTVPGM 275

Query: 302 TPISMFPKMLEHNGHRFSEFLVQCVTNTL 330
           T  S+ PK  +  G+ F +  V  +  TL
Sbjct: 276 TSHSLVPKAAKAVGYDFDQLCVTILEQTL 304