Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 227 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  124 bits (311), Expect = 1e-33
 Identities = 83/225 (36%), Positives = 124/225 (55%), Gaps = 14/225 (6%)

Query: 2   KQTLLLVEDDKNLADGLLVSLEQAGYDCL----HAETIADVKQHWDKADLVILDRQLPDG 57
           ++ +L+VED+  LA  L   L  AGY  L      + +  V+    +  L++LD  LP  
Sbjct: 4   ERPILIVEDEPKLAALLQDYLAAAGYPTLCLDNGLQVVPTVRARPPR--LILLDLMLPGR 61

Query: 58  DSVQHLMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRS 117
           D +Q   D +    +P+I++TA V   D++ GLD GA+DY+ KPF+  E+ AR++A LR 
Sbjct: 62  DGMQVCQDLRGFSAVPIIMITARVEEVDRLLGLDLGADDYICKPFSPREVVARVKAILR- 120

Query: 118 PDSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDH 177
              G          L ID+A      +G ++ LT  E  LL   A + GRVF+RD+LLD 
Sbjct: 121 --RGPQLLSNTPPRLLIDEAQYRASLDGVALDLTPLELRLLSTFARSAGRVFSRDQLLDK 178

Query: 178 VWGYNHFPTTRTVDTHVLQLRQKL----PG-LEIETLRGVGYKMK 217
           ++  +   T RTVD+H+  LR+KL    PG   IE+L GVGY+ +
Sbjct: 179 LYSDHRVVTDRTVDSHIRNLRRKLEQACPGETPIESLYGVGYRFQ 223