Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 220 a.a., XRE family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  132 bits (331), Expect = 7e-36
 Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 10/216 (4%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGY--DCLHAETIADVKQHWDKADLVILDRQLPDGDSVQH 62
           LLL+EDD  L +G+  +L + GY  D L   + A      +  D V+LD  LP  D ++ 
Sbjct: 3   LLLIEDDVALGEGIHQALAREGYTVDWLQDGSSALHALLSETFDAVVLDLGLPRMDGLEV 62

Query: 63  LMDWKKIKD----IPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSP 118
           L   ++++D    +PV++LTA    +D++ GLDAGA+DYL KPF  AEL AR+RA LR  
Sbjct: 63  L---RRLRDSGATVPVLILTARDATEDRIAGLDAGADDYLIKPFDLAELKARLRALLRR- 118

Query: 119 DSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHV 178
            +G+    +  + + +D +T+ V ++G+ + LT  E+ LL  L S  GRV TRD+L+  +
Sbjct: 119 SAGRARVVIEHAGICLDPSTQHVSYHGQPVLLTPKEYQLLHELLSPPGRVMTRDQLMQLL 178

Query: 179 WGYNHFPTTRTVDTHVLQLRQKLPGLEIETLRGVGY 214
           +G+N    + T++ H+  LR+K     I T+RGVGY
Sbjct: 179 YGWNEEAESNTLEVHIHHLRKKFTSDLIRTIRGVGY 214