Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  129 bits (323), Expect = 6e-35
 Identities = 80/221 (36%), Positives = 121/221 (54%), Gaps = 8/221 (3%)

Query: 4   TLLLVEDDKNLADGLLVSLEQAGYDCLHAETIAD--VKQHWDKADLVILDRQLPDGDSVQ 61
           T+L+++D+  +   L +SL   GY  + A T  +   +    K DL++LD  LPD D  Q
Sbjct: 6   TILVIDDEPQIRKFLRISLASQGYKVIEAGTGNEGLAQAALSKPDLLVLDLGLPDMDGQQ 65

Query: 62  HLMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPDSG 121
            L ++++   +PV++L+   +   KV  LD GANDY+TKPF   E  AR+RA LR   +G
Sbjct: 66  VLREFREWSTVPVLVLSVRASEGQKVEALDGGANDYVTKPFGIQEFLARVRALLRQAPAG 125

Query: 122 Q-DDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVWG 180
           +  ++ +    LT+D A R V  +G  + LTR E+ +L  LA + GRV T+ +LL  +WG
Sbjct: 126 EAQEAALRFGPLTVDLAYRRVLLDGAEVALTRKEYAVLAQLARHPGRVITQQQLLKDIWG 185

Query: 181 YNHFPTTRTVDTHVLQLRQKLPG-----LEIETLRGVGYKM 216
             H   +  +   V  LRQKL         I T  GVGY++
Sbjct: 186 PTHTEDSHYLRIVVGHLRQKLADDPTQPRFIVTEAGVGYRL 226