Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 224 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  131 bits (330), Expect = 9e-36
 Identities = 87/221 (39%), Positives = 126/221 (57%), Gaps = 8/221 (3%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIADVKQHWDKA--DLVILDRQLPDGDSVQH 62
           +LLVED+  +A  L  +L + G    HA T+AD  +H +    D ++LDR+LPDGD +  
Sbjct: 3   ILLVEDEPEMASVLRTALHKRGVLVDHAATLADGGRHVEATPYDALVLDRRLPDGDGLSL 62

Query: 63  LMDWKKIKD-IPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLRSPDSG 121
           + D +   + IPV++LTA   + D+V GLDAGA+DYL KPFA  EL ARIRA LR P + 
Sbjct: 63  VSDLRAAGNHIPVLMLTARDALDDRVQGLDAGADDYLGKPFAVEELLARIRALLRRPAAA 122

Query: 122 QDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHVWGY 181
             D   + + L+ D    E   + + + L R E   L  L    GR   R  L   V+G 
Sbjct: 123 LPDVLRIAA-LSFDFTHCEASVDAQRMELPRRELLALETLVRRAGRTVLRSSLERAVFGL 181

Query: 182 NHFPTTRTVDTHVLQLRQKL----PGLEIETLRGVGYKMKA 218
           +    +  +DTHV +LR+KL     G+EI ++RGVGY +++
Sbjct: 182 DAEIQSNALDTHVSRLRKKLADTGAGVEIASIRGVGYLLRS 222