Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

 Score =  129 bits (324), Expect = 5e-35
 Identities = 83/219 (37%), Positives = 123/219 (56%), Gaps = 7/219 (3%)

Query: 5   LLLVEDDKNLADGLLVSLEQAGYDCLHAETIAD--VKQHWDKADLVILDRQLPDGDSVQH 62
           +LL++DD++LA  L     + G     A   ++   K    + D  ILD  LP+ D  + 
Sbjct: 21  ILLIDDDEHLAAPLTTYFARFGCTLESAVRPSEGLAKLRAGQYDAAILDVMLPEMDGFEL 80

Query: 63  LMDWKKIKDIPVILLTALVTVKDKVTGLDAGANDYLTKPFAEAELFARIRAQLR----SP 118
             + +K  DIP+++LTA   V D+V GL+ GA+DY+ KPF   EL AR++  LR    +P
Sbjct: 81  CREIRKESDIPIVMLTARGEVMDRVVGLELGADDYVPKPFEPRELVARVQTILRRQRSAP 140

Query: 119 DSGQDDSKVVTSNLTIDKATREVFFNGESITLTRTEFDLLLFLASNLGRVFTRDELLDHV 178
            +       V   L+ID   R+V   GE + LT TEF+LL  LA   G+VF+RD++L+ +
Sbjct: 141 PAASSAQHRVFDGLSIDLDRRQVLRQGERVELTGTEFELLALLAGEPGKVFSRDDILNRL 200

Query: 179 WGYNHFPTTRTVDTHVLQLRQKLPGLE-IETLRGVGYKM 216
            G+     TR VD  V +LR+KL  L+ I+TLR  GY +
Sbjct: 201 RGHEAELYTRAVDIVVSRLRKKLEPLDCIKTLRNAGYAL 239